Designed especially for neurobiologists, FluoRender is an interactive tool for multi-channel fluorescence microscopy data visualization and analysis.
Large scale visualization on the Powerwall.
BrainStimulator is a set of networks that are used in SCIRun to perform simulations of brain stimulation such as transcranial direct current stimulation (tDCS) and magnetic transcranial stimulation (TMS).
Developing software tools for science has always been a central vision of the SCI Institute.
scirun5The Scientific Computing and Imaging Institute is excited to announce the first official alpha release of SCIRun 5.0!

New features include a new user interface based on the cross-platform Qt toolkit, updated graphics and visualization system, improved algorithm stability, expanded test coverage, a leaner and modernized codebase, better math library support through Eigen, and streamlined support for new modules and toolkit development. A Python scripting engine and Matlab interface will be available in our beta release.

SCIRun 5 provides the software infrastructure for the BrainStimulator and Forward/Inverse toolkits.

SCIRun 5 binaries and source code are now hosted on GitHub:
https://github.com/SCIInstitute/SCIRun
https://github.com/SCIInstitute/SCIRun/releases

New issues and code contributions are encouraged and available to everyone in GitHub. Please feel free to use GitHub or This email address is being protected from spambots. You need JavaScript enabled to view it. to send us your feedback or questions.