Designed especially for neurobiologists, FluoRender is an interactive tool for multi-channel fluorescence microscopy data visualization and analysis.
Large scale visualization on the Powerwall.
BrainStimulator is a set of networks that are used in SCIRun to perform simulations of brain stimulation such as transcranial direct current stimulation (tDCS) and magnetic transcranial stimulation (TMS).
Developing software tools for science has always been a central vision of the SCI Institute.
itkSNAP3 newsThe itk-SNAP project, a collaboration between UPenn's Paul Yushkevich and SCI's Guido Gerig, has released a major new version 3.0. SNAP is a software application used to segment structures in 3D medical images. It provides semi-automatic segmentation using active contour methods, as well as manual delineation and image navigation. In addition to these core functions, SNAP provides a number of supporting utilities. Version 3.0 is the first major release of itk-SNAP that is funded by the NIH grant R01 EB014346, "Continued development and maintenance of the itk-SNAP 3D image segmentation software." This version includes an almost complete rewrite of the software, along with new features focused on multi-modality image support.

For more information and downloads please visit the itk-SNAP project website.